vg
tools for working with variation graphs
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stream_sorter.hpp File Reference
#include <vg/vg.pb.h>
#include <vg/io/protobuf_emitter.hpp>
#include <vg/io/protobuf_iterator.hpp>
#include <vg/io/stream.hpp>
#include "types.hpp"
#include "progressive.hpp"
#include "stream_index.hpp"
#include "utility.hpp"
#include "hash_map.hpp"
#include "vg/io/json2pb.h"
#include <string>
#include <queue>
#include <sstream>
#include <functional>
#include <algorithm>
#include <iostream>
#include <set>
#include <vector>
#include <tuple>
#include <sys/time.h>
#include <sys/resource.h>

Classes

class  vg::StreamSorter< Message >

Namespaces

namespace  vg

Typedefs

using vg::GAMSorter = StreamSorter<Alignment>

Detailed Description

VPKG-format file sorting tools.